Physiotherapy practice management software helps clinics handle scheduling, patient notes, and billing more efficiently. When these workflows aren’t supported by the right system, clinics start losing time, accuracy, and revenue.

Most physiotherapy clinics reach a stage where manual scheduling, scattered notes, and billing fixes slow the whole practice down. This often results in missed visits, incomplete documentation, and preventable revenue loss.

To identify the tools that address these challenges, we reviewed leading practice management platforms for physiotherapy, analyzed user feedback, and examined recurring workflow issues clinics face in day-to-day operations.

Based on this analysis, we’ve put together a guide to the best physiotherapy practice management systems available today and what each one does best.

Best Physiotherapy Practice Management Software In 2025 Comparison

Software

Rating

Trial Info

Starting Price

Best For

Key Features

WebPT

4/5

Read Reviews

N/A

View Demo

$99/user/month

Get a custom quote

Physical Therapy and Behavioral Health

  • Appointment Scheduling
  • Interoperability
  • Outcome Tracking

Jane App

4.7/5

Read Reviews

N/A

View Demo

$54/user/month

Get a custom quote

Physiotherapy and Wellness Clinics

  • Online Booking
  • Charting
  • Telehealth

SimplePractice

4/5

Read Reviews

7/30-day free trial

View Demo

$49/user/month

Get a custom quote

Physical Therapy and Mental Health Clinics

  • Telehealth
  • Client Portal
  • Scheduling

TheraOffice

4.5/5

Read Reviews

N/A

View Demo

Custom Pricing

Get a custom quote

Occupational and Physical Therapy

  • Appointment Scheduling
  • Electronic Billing
  • Inbound/Outbound Faxing

Clinicient Insight EMR

4.2/5

Read Reviews

30-day free trial

View Demo

Custom Pricing

Get a custom quote

Physical and Occupational Therapy

  • Automated Compliance
  • Streamlined Clinical Workflows
  • Documentation/Charge Capture Coupling

Vagaro

4.4/5

Read Reviews

30-day free trial

View Demo

$23.99/user/month

Get a custom quote

Wellness and Physical Therapy

  • Appointment Scheduling
  • Customizable Forms
  • Client Management

Tebra

3.6/5

Read Reviews

N/A

View Demo

$99/user/month

Get a custom quote

Physical Therapy and Psychiatry

  • Online Scheduling
  • Marketing Tools
  • Data & Analytics

athenaOne

3.9/5

Read Reviews

N/A

View Demo

Custom Pricing

Get a custom quote

Mental Health and Wellness

  • Revenue Cycle Management
  • Medical Billing
  • Telehealth

PtEverywhere

4.7/5

Read Reviews

N/A

View Demo

$3/day

Get a custom quote

Physical Therapy Practices

  • Practice Management
  • Electronic Medical Records
  • Billing

1. WebPT

WebPT is a cloud-based EMR built specifically for physical therapy. It offers standardized evaluation and progress note templates, automated flowsheets, and SOAP note generation. Its AI features assist with treatment coding, gap detection in documentation, and outcome tracking, while its billing tools are designed for payer compliance and reduced claim errors.

Pros

Cons

Industry-specific templates and workflows tailored for rehab therapy

Integrated billing and RCM services streamline financial operations

Robust compliance and security measures

Frequent glitches and quarterly system outages

Failure in billing services from time to time

Best For

WebPT caters to multiple specialties and practices of all sizes, but it is most used in the physical therapy and behavioral health sectors.

Key Features

  • Appointment Scheduling
  • Billing And Revenue Cycle Management
  • Compliance And Security
  • Reporting And Analytics
  • Interoperability
  • Outcome Tracking

Pricing

WebPt offers three pricing plans based on different features. Their starter plan is priced at $99/month with further add-on charges if customization is required:

  • Starter: For small practices that require relatively basic features
  • Enhanced: For mid-size, growing practices
  • Ultimate: Premium features for enterprises, such as advanced marketing and billing tools

Disclaimer: The pricing has been sourced from third-party websites and is subject to change.

Why We Like It

WebPT stands out for physical therapy workflows with hundreds of PT-specific evaluation and progress note templates, customizable for different specialties. It is a scalable and efficient solution, with several integrations that effortlessly incorporate into your workflow. Moreover, its use of AI features for note-taking, and outcome tracking makes it a wise choice for analytical assistance as well.

User Reviews

Rated 4/5 based on 90 reviews. Most users praise WebPT for its user-friendly interface and comprehensive features, specifically noting how it simplifies documentation. On the contrary, many highlight poor customer service, billing integration issues, and frequent system outages as major drawbacks.

2. Jane App

Jane App is a cloud-based practice management software for physical therapy and wellness clinics, particularly those that are cash-based or wellness-oriented. It includes a comprehensive set of features, including online booking, day scheduling, and patient data charting. It stands out for its intuitive online booking portal, which, in addition to easy bookings and check-ins, offers automated reminders.

Pros

Cons

Syncs files, calendar, and notes across all user profiles

Centrally stores sensitive healthcare records securely

Scales easily as practices expand operations

Limitations with reporting features

Some features are non-intuitive and difficult to understand

Best For

Jane App works best in the physiotherapy and wellness clinics sectors. Other than that, it gives great value to independent health clinics and small practices.

Key Features

  • Online Booking
  • Charting
  • Payments
  • Reporting And Analytics
  • Staff Scheduling
  • Telehealth

Pricing

Jane App offers three pricing plans based on different feature lists and the scale of your business:

  • Balance: CAD $54/month (Up to 20 appointments/month)
  • Practice: CAD $79/month (plus $17.50/month/part-time practitioner, $35/month/full-time practitioner)
  • Thrive: $99/month (plus $20/month/part-time practitioner, $40/month/full-time practitioner)

Disclaimer: The pricing is subject to change.

Why We Like It

Jane App works well for small to mid-size physical therapy practices thanks to its streamlined PT documentation, exercise libraries, and customizable treatment templates. Color-coded calendars and authorization tracking help manage high patient volumes. At the same time, its multidisciplinary support, customization, and flexible pricing make it an excellent pick for solo practices and therapy clinics.

User Reviews

Rated 4.7/5 based on 110 reviews. While most users praise Jane App for its exceptional customer support and ease of use, some highlight limitations in financial reporting.

3. SimplePractice

SimplePractice is an all-in-one EHR platform that suits physiotherapy practices. It supports scheduling, documentation, and billing in a single system. Its standout feature is the integrated website builder, which lets users create a personalized website using intuitive templates, with free hosting and live updates.

Pros

Cons

Automatic appointment reminders help reduce no-shows

Facilitates coordinated team-based client care with shared calendars

Integrated payment processing allows convenient credit card payments from clients

Limited customization options for a few advanced features

Some templates can be improved

Best For

SimplePractice is suitable for both solo and group practices in healthcare and wellness, but it works best in the physical therapy, mental health, and social work industries.

Key Features

  • Telehealth
  • Insurance Claims
  • Billing
  • Client Portal
  • Scheduling

Pricing

SimplePractice has a three-tiered pricing structure:

  • Starter: $49/month
  • Essential: $79/month
  • Plus: $99/month

SimplePractice also provides a seven-day or 30-day free trial.

Disclaimer: The pricing is subject to change.

Why We Like It

SimplePractice is a good fit for small physical therapy clinics or solo practitioners who want an all-in-one, easy-to-use system. It supports customizable PT treatment plans, integrated exercise libraries, and shared care plans for collaborative teams. Moreover, its simple documentation workflows keep day-to-day PT operations efficient.

User Reviews

Rated 4 out of 5 based on 210 reviews. Users praise SimplePractice for its user-friendly interface and excellent scheduling and documentation. On the contrary, some say that reporting is limited, and others note that the mobile app has glitches and lacks proper functionality.

4. TheraOffice

TheraOffice is a comprehensive cloud-based practice management solution ideal for outpatient clinics and multi-location practices. Its strength lies in physiotherapy-specific workflows, including detailed evaluation templates, customizable body charts, and rehab-focused documentation. Clinicians can streamline patient assessments, treatment plans, and progress tracking while maintaining compliance with industry regulations.

Pros

Cons

Integrated billing and claims processing

Great customer support that offers direct assistance

Helps complete daily notes with customizable templates

Potentially long implementation time needed for complex setups

Reliance on a stable internet connection for cloud-hosted features

Best For

TheraOffice is known for its implementation in industries like occupational, physical, and speech therapy. It works well in both small and large setups.

Key Features

  • Appointment Scheduling
  • Electronic Billing
  • Comprehensive Reporting
  • Patient Portal
  • Integrated Telehealth
  • Inbound/Outbound Faxing

Pricing

TheraOffice offers personalized pricing plans based on your practice's scale and requirements. These include:

  • TheraOffice Core - $125/user/month
  • TheraOffice Extend - $175/user/month
  • TheraOffice Flex – Custom pricing

Disclaimer: The pricing is subject to change.

Why We Like It

TheraOffice is a strong choice for physical therapy clinics that handle moderate to high patient volumes. Its insurance authorization tracking and aging payment alerts help reduce billing errors and speed up revenue collection. It also features over 175 built-in reports, including KPIs, productivity tracking, and HSA receipts, that give practices an immediate look at their clinic's performance.

User Reviews

Rated 4.5 out of 5. TheraOffice is praised for its user-friendly interface and integrated billing capabilities, and data portability is noted as "a very easy task." Whereas some talk about occasional system outages and minor interface issues, such as the absence of commas in currency amounts.

5. Clinicient Insight EMR

Clinicient Insight EMR is a unified EMR and billing platform that suits outpatient rehabilitation practices. Its charge intelligence engine automatically links PT-specific clinical documentation to billing codes, handling complex compliance rules such as the Medicare 8-minute rule and CCI edits. Apart from regular practice management features, it offers waitlist management tools, text/call reminders, secure messaging options, and e-prescribing.

Pros

Cons

Systematic billing helps optimize charges and minimize the denial rate for therapy practices

Advanced analytics provide actionable, data-driven insights to optimize practice performance

Centralized patient management streamlines data access, updates, and care delivery

Lacks e-signature functionality, limiting convenience for digital document signing

Limitations in personalized reporting

Best For

Clinicient Insight EMR is suitable for physical, occupational, and speech language pathology practices.

Key Features

  • Automated Compliance
  • Streamlined Clinical Workflows
  • Documentation/Charge Capture Coupling
  • Accessibility
  • Interoperability

Pricing

Clinicient Insight EMR’s pricing structure depends on practice size and needs. However, plans are estimated to start at $50/month.

Disclaimer: The pricing has been sourced from third-party websites and is subject to change.

Why We Like It

Clinicient Insight EMR stands out for its HL-7 interoperability, which enables seamless integration with other medical applications. The software also features a mobile setup, InsightGO, which allows users to access patient data and schedules on the go. Its charge intelligence automates billing and documentation, so you don't need to learn the specificities.

User Reviews

Rated 4.2 out of 5 based on 85 reviews. Clinicient Insight EMR is known for its integrated billing and reporting features that streamline workflows and enhance patient analytics. Some appreciated how simple it was to schedule patients and manage copays. On the contrary, some note issues with system speed and occasional lag during high-volume usage.

6. Vagaro

Vagaro is a cloud-based practice management platform that offers advanced scheduling features tailored to physiotherapy workflows, including recurring appointments, waitlists, and automated reminders. The platform also allows clinics to document treatment notes, track progress, and manage patient records in compliance with industry standards.

Pros

Cons

Create, send and manage invoices

Sell memberships, packages, and gift certificates

24/7 live phone, email and chat support with free training

Limited mobile app functionality

Complex external integrations

Best For

Vagaro caters to wellness, beauty, and physical training and therapy practices mostly.

Key Features

  • Appointment Scheduling
  • Customizable Forms
  • Analytics And Reporting
  • Integrated Payment Processing
  • Client Management

Pricing

Vagaro offers two pricing plans based on the number of users in your practice:

  • One Location: $23.99/month (For 1 user)
  • Multiple Locations: Custom pricing

Disclaimer: The pricing is subject to change.

Why We Like It

Vagaro streamlines workflow with its customizable forms; you can personalize digital intake and consent documents to record specific health history. Its customizable forms let clinics capture PT-relevant health histories and consent documentation, while the scalable design can support growing patient volumes or multiple locations. Furthermore, its online services marketplace and booking are very consumer-centric, which increases the opportunity to attract more clients.

User Reviews

Rated 4.4/5 based on 40 reviews. Vagaro has an intuitive booking system and strong marketing features that facilitate client engagement. Some users also highlighted the ease of generating payroll reports. However, others have expressed frustration with system downtimes during critical work hours and mention that add-on costs for features like forms and marketplace listings can add up for small businesses.

7. Tebra

Tebra, formerly known as Kareo, is a practice management and billing platform built for independent healthcare practices, including outpatient physiotherapy clinics. The platform offers structured documentation and SOAP notes. PT clinics that handle a high volume of insurance claims can benefit from its automated eligibility checks and tracking tools for denials and reimbursements to reduce manual follow-ups.

Pros

Cons

User-friendly interface for easy navigation and seamless integration

Offers powerful analytics to drive business insights

Provides practice growth tools to connect practices with the right patients

Limited configuration options for custom modules

Some specialty templates could be improved

Best For

Tebra is designed for both solo and multi-practitioner setups and is primarily deployed in general practice, physical therapy, and psychiatry.

Key Features

  • Electronic Health Records (EHR)
  • Billing And Payments
  • Online Scheduling
  • Marketing Tools
  • Data And Analytics

Pricing

Tebra's pricing structure is based on practice size and requirements.

Disclaimer: The pricing is subject to change.

Why We Like It

Tebra is well-suited for growing physical therapy clinics that want to streamline documentation and scheduling. Its AI Note Assist helps generate PT-specific progress notes quickly. Moreover, the integrated marketing tools help practices expand and scale with automated SEO and AI-generated replies.

User Reviews

Rated 3.6/5 based on 275 reviews. Users like Tebra’s intuitive design, with many mentioning that the platform is easy to navigate even for beginners. Some users also highlight the time saved by using message templates. On the other hand, complaints of inconsistent customer support response times have also been observed.

8. athenaOne

athenaOne is a cloud-based practice management system designed for all types of independent practices. For physiotherapists, athenaOne provides structured documentation, scheduling, and billing tools. It easily integrates with labs, imaging centers, pharmacies, and other EHR platforms. It helps PT clinics coordinate care for patients coming from orthopedics, neurology, or primary care.

Pros

Cons

EHR platform allows customization to specific specialty needs

Automated workflows help reduce administrative burdens and improve efficiency

Telehealth services facilitate virtual care delivery

Communication and care tools improve patient relationships

Marketplace program connects with industry-leading partners

Limited customization options for a few advanced features

Dependency on reliable internet connectivity for cloud-based features

Best For

The software primarily serves specialty practices, hospitals, and member-centric organizations in the cardiology, mental and behavioral health, and wellness sectors.

Key Features

  • Electronic Health Record
  • Patient Engagement
  • Revenue Cycle Management
  • Medical Billing
  • TeleHealth
  • Reporting And Analytics

Pricing

athenaOne's pricing depends on the feature set and the size of your organization.

Disclaimer: The pricing is subject to change.

Why We Like It

athenaOne is suitable for medium to large physical therapy clinics that need mobile-friendly documentation and robust interoperability. Quick PT-specific templates and macros let therapists document evaluations and progress notes on the go. Its ability to pull external patient data directly into PT workflows makes it ideal for clinics that handle complex cases.

User Reviews

Rated 3.9 out of 5 based on 455 reviews. Most users praise athenaOne for its billing and user-friendly scheduling, noting that it efficiently handles appointments and revenue cycles. While others highlight technical glitches after major updates, and mention that customer support occasionally leaves critical issues unresolved for too long.

9. PtEverywhere

PtEverywhere is a practice management system specially designed for physical therapy practices of all sizes. It handles basic scheduling, documentation, billing, and communications tasks. It includes a Home Exercise Program (HEP) feature that lets users create and assign personalized video routines and exercises to patients for optimal recovery.

Pros

Cons

Tailored workflows for physical therapy clinics

Integrated EMR functionalities to simplify clinical documentation

Comprehensive features for streamlined practice management

Telehealth capabilities expand patient reach

Responsive customer support for assistance

Customization options could be limited for some users

Integration with other systems may need additional configuration

Best For

PtEverywhere is a specialized software made for physical therapy practices of all sizes.

Key Features

  • Practice Management
  • Electronic Medical Records
  • Billing
  • Telehealth

Pricing

PtEverywhere’s pricing structure consists of three plans based on your needs and practice size:

  • Starter: $49/month
  • Standard: $149/month
  • Pro: $199/month

Disclaimer: The pricing is subject to change.

Why We Like It

PtEverywhere is a good fit for small to mid-size physical therapy practices seeking an affordable, all-in-one system. Its standout feature is HEP; on the other hand, its intuitive patient portal simplifies self-booking, billing, and communication.

User Reviews

Rated 4.7 out of 5. Users strongly recommend PtEverywhere due to its ease of use, flexibility, and excellent customer support. On the contrary, some complain about limitations in the document upload feature and about the extra cost of faxing.

Key Advice For Choosing The Best Practice Management Software For Physiotherapy

Choosing the best PMS for physiotherapy means finding a platform that keeps the admin and business side of things streamlined so that you can focus on patient care and its improvement. Below are a few points to keep in mind while buying a practice management system that fulfills your clinic's specific needs.

How To Choose The Right Practice Management Software For Physiotherapy

When evaluating practice management software for a physiotherapy clinic, start with tools that support high-volume clinical documentation. PTs handle frequent follow-ups and detailed progress notes, so the platform should offer fast charting, discipline-specific templates, and body charts.

Make sure the system aligns with PT billing requirements, including the Medicare 8-minute rule, therapy modifiers, and clean claim workflows. These elements directly affect reimbursement accuracy and revenue cycle performance.

Finally, assess long-term scalability and cost transparency. As the clinic grows, you may need advanced reporting, telehealth, or marketing tools.

What Not To Overlook

  • Specialized documentation templates (SOAP notes, body charts, intake forms)
  • Integrated billing and Revenue Cycle Management (RCM)
  • Compliance features (HIPAA, Medicare, MIPS)
  • Patient engagement tools (Home Exercise Programs, Portals)
  • Mobile app functionality for therapists on the go
  • Implementation support and customer service quality
  • Scalability for multi-location growth